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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) for “Empowering Automated Laboratories: … to explore complex biological and environmental systems using advanced experimental and informatic tools at no cost. …
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Introducing New Members of the JGI User Executive Committee
The JGI welcomes three new members to their User Executive Committee (UEC) – Jack Gilbert, … to serve on the UEC. For microbial ecologist Gilbert at the University of California (UC) San Diego, being on the …
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CSP Functional Genomics
Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … function.  The emphasis is on projects leveraging JGI’s DNA synthesis and ‘omics capabilities to enhance … to this call may be submitted to the JGI at any time using a simple web-based form and are reviewed annually. For …
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UC Merced Interns Reflect on Their JGI Summer Projects
… past summer, 10 students from UC Merced worked closely with JGI scientists on research projects that contribute to the larger mission of the U.S. Department … wide — from implementing new data visualization tools, to using natural language processing techniques to categorize …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, 24 large-scale … from Chris Bowler of France’s Institut de Biologie. His team proposed to sequence  Chaetoceros microalgae, or …
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Partners
The JGI leverages its existing partnerships and develops others providing complementary expertise to advance the science and serve as impact multipliers . The JGI has a … and other efforts. The JGI works closely with DOE computational facilities (e.g., the National Energy Research …
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An Automated Tool for Assessing Virus Data Quality
… can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … host organism. With the virus-host boundary clearly defined using functional annotation methods, it was possible to …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with excitement and determination as they came onsite. From data carpentry to science … Hualan Liu, Building Expression Host in Bacilli Class using CRAGE Technology Emerald Nash and mentor Jonelle …
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JGI Hosts GPU Hackathon in May
WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit … high-performance computing resources, an upcoming hackathon led by the Oak Ridge Leadership Computing Facility … is a five-day coding event that offers participating teams the opportunity to either jumpstart acceleration or …
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Partnerships: Myco-Ed
The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based … DNA is extracted from samples, which is then sent to the JGI for genome sequencing, assembly and annotation. … The … can analyze their own data alongside public data, using a variety of open-source bioinformatics apps and …
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JGI announces final round of 2022 Functional Genomics awardees
Twice each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential … deadline is July 31. You can learn more about our Community Science Program here .  …
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … user service and workforce development. As of February 2025, we have already completed 37% of the two-year …
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