Feature selection and causal analysis for microbiome studies in the presence of confounding using standardization
Results
Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
Defining the Sphagnum Core Microbiome across the North American Continent Reveals a Central Role for Diazotrophic Methanotrophs in the Nitrogen and Carbon Cycles of Boreal Peatland Ecosystems
Plant compartment and genetic variation drive microbiome composition in switchgrass roots
Terabase-Scale Coassembly of a Tropical Soil Microbiome
Uncovering Novel Genomes from Earth’s Microbiomes
iPHoP: A Matchmaker for Phages and their Hosts
A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
2022 Progress Report
2024 Progress Report
How Microbes Can Protect Plants in Drier Straits
JGI Interns at UC Merced Earn CAMP Merit Awards