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Game On: High School Students Drive Everglades Metagenomics Study
… Sample Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the … of a spoonful of dirt with the question: Do you want to find out what is in this soil? Jonathan had been reaching … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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The Trichoplax genome and the nature of placozoans
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Facile Recoding of Selenocysteine in Nature
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Phage–host coevolution in natural populations
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Unveiling plasmid diversity in nature
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Georg Rath
… of life science and computational science with notable stops at NERSC, IMBA (Institute of Molecular Biotechnology, … infrastructure in close collaboration with the local scientists. As the lead of the infrastructure team and the chair … built by his team is unbureaucratic and driven by code, without putting humans in the loop. He is a big …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … previously unseen — is, in fact, a microscopic water mold, genetically related to such aquatic species as diatoms and … multi-institutional, multi-investigator effort was to decode the complex Phytophthora ramorum genome. The JGI …
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A User-Centered Approach to Accessing JGI Data
… year, it was only accessible through the plant portal  Phytozome . Now the portal offers a way for users to more … also elaborated on the following topics. Q(uestion): What is the Data Portal’s scope? A(nswer): The JGI Data Portal currently allows users to find files by searching file metadata (info describing the …
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Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the … community as a user facility pioneering functional genomics to solve the most relevant bioenergy and environmental … Reviewers consider technical feasibility and readiness to begin work, checking such factors as genome size, …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… chilly waters of Antarctica, tiny ocean-dwellers called phytoplankton play an outsize role in cycling carbon and … into the function and activity of phytoplankton genes and looking at how communities of these microalgae interact, … . At that time, they noted that the F. cylindrus genome encoded more proteins requiring zinc than non-polar algae. …
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Pinning Down a Piece of Photosynthesis
… a cyanobacterial protein, researchers have new insights into how these ocean photosynthesizers cycle carbon in … questions about structure and function,” Blaby-Haas said.  Looking at blueprints in high-throughput This work builds on … group. In 2011, they inventoried a swath of blueprints to find parts that photosynthesizers share. The end result was …
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