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… version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  … website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  … at  https://phytozome-next.jgi.doe.gov/jbrowse/index.html How can I access the genome data that was formerly at …

… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology … 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science …

… New studies show methanogenesis is not exclusively for Euryarchaeota. … enabled by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … is not limited to  Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to …

… Mini-Metagenomics Approach Helps Identify Novel Archaeal … Biohub, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … applied mini-metagenomics to these samples by sorting the microbes into small pools of cells that were then sequenced …

… The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the most relevant bioenergy … and readiness to begin work, checking such factors as genome size, polymorphism level, sample quality and …

… Global chocolate brands can’t exist without cocoa According to the  International … (ICCO), global cocoa bean production in 2017-2018  was 4.6 million metric tons . The global chocolate brands couldn’t … will be cocoa for chocolate tomorrow In 2010, a draft first genome of  Theobroma cacao  – the tree that produces cacao …

… Despite their diminutive stature, “short plants” such as mosses could be … plant genetic sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …

… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants … Dr. Cole’s research focus has been on understanding how microbes can colonize plant roots, focusing on genetic …

… with JGI scientists on an ambitious project: to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and robots have made these …

… we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … and thrive — some varieties grow their leafy stalks 16 to 18 feet into the air. Beyond being a staple grain eaten … climate has earned it a place on the JGI’s Flagship Plant Genome roster. Sorghum has an important feature in common …

… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … Analysis of the genome sequence also provides insights into how the multiple chromosomes of Miscanthus arose by ancient …