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A Collaboration to Improve Plant Genome Annotations Across Species
… Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in … the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research … – in over a dozen plants. To learn more about the project, HudsonAlpha’s Research Communication Manager Sarah …
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Natural Prodcast Episode 19: Bill Fenical
… DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the … why it’s so hard to succeed, and we talk about an ongoing project I’ve been working with him on as an exploration into … as a postdoc working under Brad Moore on the Salinispora project,  so this is pretty comfortable territory for us, …
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Graduate Students Get Thesis Research Opportunity at the JGI
… the opportunity to pursue part of their thesis research at one of the DOE national laboratories or national user … between 3-12 consecutive months. Their proposed research projects address scientific challenges central to Office of … into workflows with the DOE Systems Biology Knowledgebase (KBase) , in collaboration with computational …
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Natural Prodcast Episode 15: Katherine Duncan
… Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk … of North America. So then I came back and I worked on an EU project, the Scottish Association for Marine Science. And … awesome. I should point out that we also have a couple of projects in the lab that also work in microalgae as well. So …
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Ancient Algae Reveal Secrets of Plant Evolution
… Research uncovers the genetic foundations that helped plants conquer land over 600 million years ago. The Science By studying the genes of land … Change’ (SPP 2237), and grant 410739858 in the frame of the project CharMod to K.v.S., as well as RE 1697/16-1 (CharMod) …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of … terpenes play key roles in plant growth, defense, and environmental interactions. Terpenes are also economically important because of … carried out by EMBRAPA as part of the  Corymbia  genome project was supported by FAPDF grant “Nextree” …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake … the specialized software and supercomputers behind this project. But every part of this project depends on lakewater samples — so this episode is a …
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Cultivating Symbiotic Antarctic Microbes
… Nanohaloarchaeota cultures reveal they are symbionts and not free-living organisms. The Science Researchers … to experimentally determine that Nanohaloarchaeota are symbionts, rather than free-living organisms as had been … trove” of unknown microbes that play critical roles in environmental processes (related to interactions of soil-sediment …
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Defining a Pan-Genome for Antarctic Archaea
… The Science Haloarchaea flourish in hypersaline environments, and researchers are interested in learning how … microbes have learned to adapt from marine to hypersaline conditions by studying the microbial communities in Antarctic … (DP150100244) and the Australian Antarctic Science program (project 4031). The work conducted by the US Department of …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial diversity is wilder than ever. Imagine … researchers exploring a dark room with a flashlight, only able to clearly identify what falls within that single … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Boosting Small Molecule Production in Super “Soup”
… from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: … smoothly. As reported August 26, 2021, in Nature Communications , researchers led by Hal Alper at The University of … Michael Jewett of Northwestern University describe a two-pronged approach that starts with engineered yeast cells but …
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Boosting Small Molecule Production in Super “Soup”
… from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Yeast strains engineered for the biochemical conversion of glucose to value-added products are limited in … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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