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Genomes OnLine Database (GOLD) v.8: overview and updates
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Standardized naming of microbiome samples in Genomes OnLine Database.
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Comparative genomic analysis reveals evidence of two novel Vibrio species closely related to V. cholerae
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Comparative Genomic Analyses of Cellulolytic Machinery Reveal Two Nutritional Strategies of Marine Labyrinthulomycetes Protists
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An Integrated Dataset to Understand Ecosystem Interaction
… Summary The 27 samples studied by researchers came from two environments: natural forests and plantations managed … were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through … Another focus area was inter-organismal interactions, and two fungal proposals focus on symbiotic relationships. … is not modifiable in crops, which can help optimize crop improvements. Some of the proposals were associated with …
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UC Merced Interns Reflect on Their JGI Summer Projects
… and develop presentation skills as well as build their network in the field of genomics and scientific research. The …
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Two decades of bacterial ecology and evolution in a freshwater lake
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science … using Panicum hallii (Hall’s panicgrass), by generating two complete genomes from varieties that diverged over a million years … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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Data Ecosystem
… its partnership with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique access to both expertise … analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to … leaves, a team of researchers sequenced  P. trifoliata ’s genome. Scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Complete Genome Sequences of Two Phylogenetically Distinct Nitrospina Strains Isolated from the Atlantic and Pacific Oceans
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