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Help from Citrus’ Bitter, Hardier Cousin
… that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of … resists a disease ravaging citrus groves: citrus greening. From 2012 to 2016, in Florida alone this disease caused an …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… novel, candidate viral genome found in the deep subsurface ecosystem. The Science Altiarchaea are carbon-fixing … foreign genetic elements by incorporating short sequences from infecting viruses and phages. In these sequences are … to viruses. To do so, they compared samples collected from an aquifer in 2012 and 2018 against a biofilm sample …
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Single Cell Research Group
… such effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic … J. Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection.” Nat Biotechnol 36(4): … discovery of biomass-degrading genes and genomes from cow rumen. Science 331, 463-7 (2011). Newton I.L., …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… doing when starting the lab. It has been, especially from an early career perspective, been absolutely instrumental in a lot of the … chemicals with a wide range of potential applications. Q&A from the Webinar Q(uestion):  Are the JGI capabilities …
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Partnerships: Myco-Ed
… selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ iNaturalist … sequencing and tissue preparation), allowing participation from a growing audience. For consistency and to reduce … Institute where high molecular weight DNA is extracted from samples, which is then sent to the JGI for genome …
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You Can Move, But You Can’t Hide
… entities that seek to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are … and plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool  recently described in  Nature … (IMG/PR) , which currently has more than 700,000 plasmids from genomes, metagenomes and metatranscriptomes. To lower …
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Defining the Sphagnum Core Microbiome across the North American Continent Reveals a Central Role for Diazotrophic Methanotrophs in the Nitrogen and Carbon Cycles of Boreal Peatland Ecosystems
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to … the world. Most of those researchers send their samples in from afar, without ever hearing much about the sequencing …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… are genes out there that affect this phenotype.’”  Results from A “Massive Amount” of Sequencing  Seed dispersal is … let a plant go all the way to seed but prevent the seeds from falling,” said JGI Plant Program head Jeremy Schmutz , … to developing and applying scientific advances to health, agriculture, learning, and commercialization. Opened in …
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From Textbook to Real World Applications
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10 From JGI on the 2019 Highly Cited Researchers List
Woyke , Biology & Biochemistry category Some highlights from projects each of these researchers were involved in … Aspergillus fungi play important roles in areas ranging from industrial production to agricultural plant pathogens. … the work brought together virus experts, representatives from the Genomic Standards Consortium (GSC), and the …
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Game On: High School Students Drive Everglades Metagenomics Study
… that the project had already received enthusiastic support from the JGI Director, Nigel Mouncey. Jonathan credits his … (metabolizing) methane within the Florida Everglades ecosystem. There are no roads or real human traffic through … the soil and acquire the permits to do so. They used images from Google maps to plan their route, and had to adapt when …
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