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EnZymClass: Substrate specificity prediction tool of plant acyl-ACP thioesterases based on ensemble learning
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You Can Move, But You Can’t Hide
… created by researchers under the direction of Microbiome Data Science Group Lead Nikos Kyrpides at the U.S. … for identifying viruses and plasmids. Until now, most other tools have focused on identifying only specific plasmids or … Contract No. DE-AC02-05CH11231. This work also received support from the Genomic Science Program in the U.S. …
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Natural Prodcast Episode 22: Alison Narayan
… so starting from some of the enzymes that we had the most data on and knew the most about, working with my … You can really design your experiments in a way that’s data rich, and you can really just learn so much, which then … with. DAN UDWARY: Yeah. ALISON NARAYAN: And there are other tools that I think are really useful, that again are set up …
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Natural Prodcast Episode 20: Brian Bachmann
… a postdoc and went to industry to see what they had, what data they had. DAN UDWARY: And they had a lot of data for the time, right? BRIAN BACHMANN: For the time. … an undergraduate and not succeeding and still using all the tools from mechanistic enzymology to natural product …
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Connecting metabolome and phenotype: recent advances in functional metabolomics tools for the identification of bioactive natural products
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MArVD2: a machine learning enhanced tool to discriminate between archaeal and bacterial viruses in viral datasets
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Automated group assignment in large phylogenetic trees using GRUNT: GRouping, Ungrouping, Naming Tool
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Genome Calligrapher: A Web Tool for Refactoring Bacterial Genome Sequences for de Novo DNA Synthesis
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Genome‐wide associations with flowering time in switchgrass using exome‐capture sequencing data
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The BioMart community portal: an innovative alternative to large, centralized data repositories
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Nontargeted virus sequence discovery pipeline and virus clustering for metagenomic data
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Combining Hadoop with MPI to Solve Metagenomics Problems that are both Data- and Compute-intensive
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