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Nikos Kyrpides
… of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes and Metagenomes Program since 2011. Prior to joining … bacteriophages. Cell . 185(21):4023-4037 Nayfach S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… . Susan Wessler , UC Riverside Shaping up conservative genomes Keynote Talk Title: Transposable Element-Mediated … Structural Variation — From McClintock to Pangenomes Susan Wessler is plant molecular biologist and … for 45% of the human genome and 50-80% of certain plant genomes including maize, wheat and barley. During her …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… improved, but currently require input in the ~ 30 – 100ng range. Note that beyond quantity, input quality (i.e., … weight DNA) is an important factor as well for PacBio metagenomes. Q: How many PacBio metagenomes can I submit?  How … deeply are metagenomes sequenced? A:  For the next call ( CSP New Investigator ), up to 4 long-reads (PacBio) …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… has been at the forefront of Covid-19 research (see his  2021 VEGA talk ). A global authority on viruses, Holmes was …
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Help from Citrus’ Bitter, Hardier Cousin
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Better Genome Editing for Bioenergy
… This work was supported by DOE Joint Genome Institute grant  CSP-503076 (IW, HA, and MB) and NSF  1706545 (IW). HA and JW … Foundation Graduate Research Fellowship Program ( DGE-1110007 ). SA, AB, and MB were supported by NSF  1706134 . SL …
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How Maize Makes An Antibiotic Cocktail
… Science Program . And the work is part of a  larger CSP Functional Genomics proposal to understand terpene  … a DOE Joint Genome Institute Community Science Program (JGI-CSP) grant (CSP2568 to P.Z., ES and AH), and by a fellowships provided …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… the JGI is sequencing thousands of bacterial and archaeal genomes from diverse branches of the Tree of Life.  Its …
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Natural Prodcast Episode 6: Marc Chevrette
… the secondary metabolism side of things was looking at genomes and seeing where the really hard things to sequence … curious about what they were, what they were doing in these genomes and how they change over time. And yeah, I mean, … in about a year’s time, we’d be doing a rate of around 1000 genomes per year and an order of magnitude more than …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… He was also senior author on a study which identified new genomes highlighting the diversity of white rot fungi in the … of a study to develop a method for identifying polyploid subgenomes without needing to know the genomes of their ancestors. Tanja Woyke contributed to a …
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Biodesign
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Toward More Efficient Artificial Photosynthesis
… was enabled in part through the Community Science Program (CSP) of the U.S. Department of Energy (DOE) Joint Genome … (Berkeley Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of … compounds through a light-driven process. The JGI’s  CSP Functional Genomics call is open year-round, and reviews …
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