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A roadmap for equitable reuse of public microbiome data
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Polyphenol rewiring of the microbiome reduces methane emissions
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Breeding of microbiomes conferring salt tolerance to plants
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… in algal communities, including the algae-associated microbiomes that influence algal diversity and gene … The Biogeography of Algal Microbiomes from the Arctic to the Antarctic …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… tool called geNomad that identifies and classifies mobile genetic elements based upon their gene content and their genetic sequences. Roux was first author on a study … Jeremy Schmutz’s 2023 published work included investigating sphagnum moss and the role the plant’s sex plays in its …
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JGI@25: Studying Sorghum’s Survival Skills
… each variety stores sugars and sequesters carbon. 2015: Epigenetic Control of Drought Tolerance in Sorghum (EPICON) … over 50 other diverse sorghum genomes. Deep sequencing and genetic linkage analysis improve the genome’s accuracy, and … including traits useful for adapting to harsh conditions. 2019: JGI and collaborators analyze the sweet sorghum RIO …
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JGI Hosts GPU Hackathon in May
… WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing … is organizing nearly a dozen hackathons around the world in 2019, only the JGI hackathon is particularly focused on … code to a new architecture. Proposals are due March 1, 2019 for the JGI hackathon, set for May 6-10, 2019, in …
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Tanja Woyke
… Member for ISME J (Senior Editor 2016-2021), Peer J (2015-2019), Scientific Data (2017-2019). Reviewer for major journals and funding agencies, … Nature Communications, Nature Protocols, Nature Reviews Genetics, ISME J, Nucleic Acids Research, DOE Small Business …
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Defining a Pan-Genome for Antarctic Archaea
… has been enabled through the JGI Community Science Program (CSP) . Cavicchioli and his team compared two strains of … are available through JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) platform. These data allowed researchers … a haloarchaea “pan-genome.” Described as the total pool of genetic material comprised by all members of a species, the …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers focused on the full composition … the pangenomes of plants.  Pangenomes encompass a plant’s genetic diversity beyond a single reference genome, which is …
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What Happens Underground Influences Global Nutrient Cycles
… and bioproducts, Biogeochemistry, and Inter-organismal interactions. Algal research features prominently among the … on an aspect of the  Phenotypic Response of the Soil Microbiome to Environmental Perturbations   under PNNL’s Soil Microbiome SFA, which aims for a systems-level understanding …
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A data analysis and coordination center for the human microbiome project
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