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The JGI announces FY25 awardees for our Community Science Program Annual Call
… Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped … of the innovative research  being proposed by this year’s CSP investigators,” said Tanja Woyke, Deputy Director of … including one previous New Investigator awardee.  The CSP Annual call is focused on large-scale genomic science …
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Jeremy Schmutz
… Institute and the collaborative projects funded through the CSP program. In addition to continuing to develop strategies … improvement. Nature Genetics 52: 525-533. Lovell, JT et al. 2018. The genomic landscape of molecular responses to … World’s Most Influential Scientific Minds 2014-2018 (Plant & Animal Science) Clarivate Analytics Highly …
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Frederik Schulz
… user community and supports various user projects in the Microbial Program. In an LDRD-funded project, Dr. Schulz … Molecular Microbiology, University of Vienna (Austria) PhD Microbial Ecology and Bioinformatics, University of Vienna … binning of a giant virus. mSystems. 5 (3) Schulz et al. (2018) Hidden diversity of soil giant viruses. Nature …
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How to Target a Microbial Needle within a Community Haystack
… strides in generating genome sequences for members of the microbial world through bulk community sequencing … of HCR-FISH+FACS for selectively enriching low abundance microbial groups from complex natural communities. This type …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has … could allow them to manipulate microbiomes to facilitate microbial solutions to challenging environmental problems, … from diverse environments and grouped those with similar microbial communities together. Those similarities, based on …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… and developing RNA barcoding systems to optimize microbial bioreactors. This genomic research creates new … of sequence. “We are thrilled to support this year’s CSP awardees as they embark on ambitious projects that span … research community. See below for the full list of 2026 CSP Large Scale Call recipients.    …
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JGI Scientists Pen Genome Watch Articles
… the  Nature   Reviews column all started with an email in 2018.  Tanja Woyke , who leads the  Microbial Program at the JGI, received a message from Andrea … with Du Toit as their editor. The partnership has proven so successful this year, JGI is providing another three Genome …
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Defining a Pan-Genome for Antarctic Archaea
… adapt from marine to hypersaline conditions by studying the microbial communities in Antarctic lakes, some of which have … haloarchaea and the structure and extent of the Antarctic microbial pan-genome. Since these microbes thrive under … has been enabled through the JGI Community Science Program (CSP) . Cavicchioli and his team compared two strains of …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology … Graham, Ramon Huerta, Ryan Johnson, and Lev Tsimring. "Microbial microfluidic biosensor." U.S. Patent 11,209,412, …
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Virus-Microbe Interactions of Mud Island Mangroves
… worked with the JGI through a Community Science Program (CSP) proposal, and Rambo’s research builds on that. “The purpose of this CSP is to better understand methane cycling in mangrove … Rambo’s work was overseen by Susannah Tringe, head of the Microbial Systems group. He also worked with Simon Roux and …
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Mission
… crops, enhance biomass conversion efficiency, and discover microbial pathways for producing biofuels, biochemicals, and … Critical Minerals and Materials (CMM): Genomic studies of microbial and plant metabolism reveal biological routes to …
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Webinar: MycoCosm Tutorial
… A(nswer): Our focus is on fungi, algae, plants, and the microbial world but we also annotated several Phytophthora … genomes and those external genomes that enable JGI CSP projects – please first contact us … also described in Haridas S, Salamov A, & Grigoriev IV. (2018) Fungal Genome Annotation. In Methods in molecular …
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