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… For the first time, a team has comprehensively described host-virus dynamics in a microbial … In microbial mats, communities of microorganisms live among viruses that infect them. But what trends govern those … virus had been infecting the cell. The team assembled 130 genomes from their sample — a small proportion of the …

… Leveraging massive comparative genomics to decode millions of mystery genes and lay a future-ready foundation     … one of the world's most comprehensive collections of fungal genomes. A sweeping analysis published in Nature Reviews … of scientists. Initiatives like our 1000 Fungal Genomes Project established crucial phylogenetic frameworks spanning …

… these teams provide analysis support and R&D for production and user science. He received his Ph.D. from the Wellcome … to study genome regulation in human and other vertebrate genomes. When he joined the JGI, he worked as a project scientist and then as a research scientist on …

… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural … DAN UDWARY: Nothing to be sorry about. Yeah, no, your project was really cool. The vanadium haloperoxidases are … organisms we’re finding– at least by looking at their full genomes — are really not like anything that’s been …

… Interns contributed to a number of projects, from refining lab … Asaf Salamov, Igor Grigoriev Project:  Training new JGI genomes with Tiberius Brandon Imstepf Mentor: Brian Bushnell …

… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics … recent computational technology advances in management, processing and visualization of “big data,” and artificial … 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science …

… The User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, …

… Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in … the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research … Avinash:   JGI puts huge efforts into generating reference genomes for new species allowing it to fill gaps in the …

… natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg … Program , sequences of several hundred green millet plant genomes were generated, though the final analyses focused on … JGI group has been wonderful to collaborate with, and this [project] wouldn’t have been possible without their …

… enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes … in five years, have come out of the JGI-supported project. “The JGI DNA Synthesis Science Program has been … is famous for its work sequencing human and environmental genomes. But we now have these DNA synthesis capabilities …

… Team develops a computational pipeline to sift and characterize RNA virus sequences.  … viruses,” said Simon Roux , a JGI scientist and one of the project co-leads. “But same as DNA viruses, RNA viruses … datasets from the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) system. “We then looked into …

… clearly. The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) participants. One is a fungus … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … (for DNA sequencing and assembly); by a three-year subcontract to DA, FL, and FD (for bioinformatics) from a DOE …