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Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in … the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research … Avinash:   JGI puts huge efforts into generating reference genomes for new species allowing it to fill gaps in the …

… from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: … within their walls they have both the machinery to make products such as proteins, and the mechanisms for … produced BDO at higher productivity rates than were noted inside the cell. “One of the huge advantages of the …

… has been published. Analysis of the genome sequence also provides insights into how the multiple chromosomes of Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene … Understanding the evolution of polyploidy, and how genomes respond to extra chromosome and gene copies, will …

In honor of the JGI's 25th anniversary in 2022, we have … has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community … Hungate1000, a catalog of 410 rumen microbe genomes. The project relied upon resources from laboratories around the …

Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids with two … multiple copies of some genes. This polyploidization process is ongoing and many plants, including agricultural …

In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the … (California State San Marcos) about how the Adopt-A-Genome project got started. Plus, Kalyani Maitra (California State Fresno) and two students, Angela and Mark Soghomonian share what it was like to take on one of these …

To expand access to integrated data, improve tools and infrastructure as well as ensure cohesive … specifically optimized for high-performance computing environments. … KBase is a critical partner in enabling systems … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and …

… … DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural … DAN UDWARY: Nothing to be sorry about. Yeah, no, your project was really cool. The vanadium haloperoxidases are … organisms we’re finding– at least by looking at their full genomes — are really not like anything that’s been …

… of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for …

… single drop of water could outnumber a small city’s population, the number of viruses in the same drop—the vast majority … and genome size from small, to large and even giant. The genomes of giant viruses are on the order of 100 times the … viruses in the various ecosystems, their diversity, their predicted metabolic features and putative hosts,” noted …

… work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the sugarcane cultivar … of Experimental Botany (IEB) was supported by the ERDF project “Plants as a Tool for Sustainable Global …

Biology is currently experiencing a revolution brought on by rapid developments in genomics and other … 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … of genomes from uncultivated microbes (Nature 2019). Other projects in the group include the sequencing and comparative …