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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
With a new methodology, scientists are now getting more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for … the cell breaks apart and its DNA is copied millions of times using a method named Multiple Displacement …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The … Understanding the evolution of polyploidy, and how genomes respond to extra chromosome and gene copies, will … studying genes that are turned “on” or “off” at different times and in different parts of the plant, the team …
Learn more
David Goodstein
With a background in experimental and computational surface physics, Dr. … in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative genomic … of interest and gene copy number variation across multiple genomes.  eLife 11, e78526. Li et al., 2021.  Plant …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Congratulations to Jane Grimwood, who has been appointed the Loretta Purdy Spencer Chair in Genomics at the … after the JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford Human … she has continued to contribute across JGI plant genomes. She has appeared on the annual Highly Cited …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in … it can also serve as a stepping stone to studying many genomes simultaneously through multiDAP, which allows … Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We noticed a few years ago that …
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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The … (Spruce and Peatland Responses Under Changing Environments) project, assessing how northern peatland ecosystems respond … researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different …
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Mission
… by the Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … the completion of DOE’s commitment to the Human Genome Project , the University of California, which manages … who apply for JGI resources and are engaged in active projects—each year. In addition, several thousand data users …
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help … plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots … on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled a mycobiome culture …
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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have … has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community … Hungate1000, a catalog of 410 rumen microbe genomes. The project relied upon resources from laboratories around the …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent … Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … anything. The collaborative consortium behind the GROWdb project demonstrates not only how researchers can …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The … Understanding the evolution of polyploidy, and how genomes respond to extra chromosome and gene copies, will … studying genes that are turned “on” or “off” at different times and in different parts of the plant, the team …
Learn more
A Redesign for Yeast’s Genome, Chromosome by Chromosome
To engineer yeast to do more, and understand genomes in general, … yeast’s native chromosomes with synthetic versions. This project has turned out to be an international collaboration, …
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