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Genome sequence of the moderately thermophilic, amino-acid-degrading and sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314T)
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Genome-wide functional screens enable the prediction of high activity CRISPR-Cas9 and -Cas12a guides in Yarrowia lipolytica
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Biotech Partners
… and professional development experiences through in-classroom instruction and paid internships sponsored by …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… didn’t really fully exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really … Synthesis Science Head] Yasuo [Yoshikuni] gave back in 2016.” Alper’s first approved JGI proposal came through the … moved to UC Davis in 2014,” recalled Philipp Zerbe of the University of California, Davis. “The work with JGI was one …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Program, and coordinates the development of the virus and plasmid workflows for the National Microbiome Data … and functionally explore viral genetic diversity.  In 2021, he was among those selected by the DOE Office of Science …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  … example, a group of JGI users led by Steven Hallam at the University of British Columbia, recently deployed CRAGE to … teamed with longtime JGI collaborator Jeffery Dangl at the University of North Carolina at Chapel Hill, using …
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David Goodstein
Dr. Goodstein held positions at Cornell, IBM, Utah State University, and semiconductor equipment manufacturer … 35 (2), 644-672 A Sreedasyam et al., 2023. JGI Plant Gene Atlas: an updateable transcriptome resource to improve … across the plant kingdom. Nucleic acids research 51 (16), 8383-8401. JT Lovell et al., 2022. GENESPACE tracks …
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Identification of a gene encoding the last step of the L-rhamnose catabolic pathway in Aspergillus niger revealed the inducer of the pathway regulator
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Disentangling the effects of sulfate and other seawater ions on microbial communities and greenhouse gas emissions in a coastal forested wetland
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Annual Genomics of Energy & Environment Meeting
… goals. Keynotes: M. Francesca Cotrufo, Colorado State University N. Louise Glass, UC Berkeley Ian Foster, Argonne National Laboratory Sue Rhee, Michigan State University   …
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology and … research at the Institute for Genome Sciences at the University of Maryland School of Medicine and her graduate … initiatives and more.  … BS, Biochemistry and Cell Biology, University of California, San Diego ( magna cum laude ) PhD, …
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Webinar: Introducing the BioSANS capability
… (CSMB) at Oak Ridge National Laboratory.   On March 2, 2021, the Environmental Molecular Sciences Laboratory hosted a … Molecular Biology at ORNL Himadri Pakrasi, Washington University in St. Louis on “Solar Energy Conversion in Cyanobacterial Membranes” Marcus Foston, Washington University in St. Louis on “Integrated Multi-omics Analyses …
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