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CO2 response screen in grass Brachypodium reveals the key role of a MAP kinase in CO2-triggered stomatal closure
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Natural Prodcast Episode 19: Bill Fenical
… DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the … to succeed, and we talk about an ongoing project I’ve been working with him on as an exploration into the secondary … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… it. I’m keeping to my schedule. This should be coming out on the first Thursday of the month, just like I promised. … there. We talked about several different pieces of her work, including bacterial quorum sensing and its effects on … exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of …
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Correlation-based network analysis combined with machine learning techniques highlight the role of the GABA shunt in Brachypodium sylvaticum freezing tolerance
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A Grass Model to Help Improve Giant Miscanthus
… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … chromosomes of Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene … by an international, multi-institutional team. The work was a joint effort led by scientists at the Center for …
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Natural Prodcast Episode 22: Alison Narayan
… DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the … we usually talk to. She’s a chemist, and describes her work as exploring and exploiting biocatalysts – that is, … enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us …
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The CC–NB–LRR protein BSR1 from Brachypodium confers resistance to Barley stripe mosaic virus in gramineous plants by recognising TGB1 movement protein
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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Plastome evolution in annual Brachypodium species reveals widespread heteroplasmy and chloroplast capture, lineage-specific codon usage bias, and low positive selection
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg … Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … a good reason nobody’s done it; it’s a heck of a lot of work. I wouldn’t have done it without the contribution of …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a … these are complicated interactions to untangle. Fungi work in cooperation to support a forest, and species vary … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae … The Secondary Metabolites Program targets the vast and … gene clusters (BGCs) being expressed. The program works to uncover these hidden biochemical resources by …
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