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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… The Sequence to Function: Applications and Analysis for the … and informal networking events. JGI will present both a genome center talk and a tech talk. Stop by the JGI booth to …
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Automated annotation of scientific texts for ML-based keyphrase extraction and validation
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EcoBOT: an AI/ML enabled automated phenotyping capability for model plants
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … and developed new tools to map that soil RNA to fungal genomes.  The U.S. Department of Energy (DOE) Joint Genome … at Lawrence Berkeley National Laboratory (Berkeley Lab) sequenced 1 trillion bases — a terabase — of soil RNA for …
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JGI@25: Using Team Science to Build Communities Around Data
… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to create two reference genomes for all fungi … Genome Insider …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… Woyke as a pioneer in uncovering the hidden diversity of “microbial dark matter”–that uncultured and unknown majority … American Academy of Microbiology (AAM). She has led JGI’s Microbial Genomics Program since 2009 and heads the Single … Scientific Achievement , and was among the Lab’s 2015 Women @ the Lab honorees. Woyke is the second JGI …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… City. Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library … soon after the JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford … A 2021 Nature paper announcing a high-quality reference sequence of the complex switchgrass genome , using samples …
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Trent Northen
… Joint BioEnergy Institute and the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to … Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes … Wang G et al. Chassis-Independent Recombinase-Assisted Genome Engineering Enables Rapid Activation of Biosynthetic …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Berkeley National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and released a … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Tanja Woyke Elected to American Academy of Microbiology
… National Laboratory (Berkeley Lab), Woyke has led JGI’s Microbial Genomics Program since 2009 and heads the Single … Scientific Achievement , and was among the Lab’s 2015 Women @ the Lab honorees. Woyke’s research focuses on … genetic material of uncultivated microbes and link their genomes to the roles they play in the environment. One …
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JGI@25: From Life at the Extremes to Editing Genomes
… Science group led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense … is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … CA. Banfield’s observations of the CRISPRs in her microbial sequences piqued Doudna’s interest. As Doudna noted in her …
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