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Seasonal Dynamics of Core Fungi in the Switchgrass Phyllosphere, and Co-Occurrence with Leaf Bacteria
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Evolutionary history of arbuscular mycorrhizal fungi and genomic signatures of obligate symbiosis
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An HMM approach expands the landscape of sesquiterpene cyclases across the kingdom Fungi
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Comparative genomics of Mollicutes-related endobacteria supports a late invasion into Mucoromycota fungi
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Genome-wide prediction and transcriptome analysis of sugar transporters in four ascomycete fungi
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Serendipita Fungi Modulate the Switchgrass Root Transcriptome to Circumvent Host Defenses and Establish a Symbiotic Relationship.
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Microbiome Data Science Team
… include exploration of the global diversity of alternative genetic codes (Science 2014), unearthing hundreds of … Science 2017, Nature Microbiology 2018), discovery of new genes with important biotechnological applications (e.g., … Science  356: 82-85 Ovchinnikov S. et al. (2017) Protein structure determination using metagenome sequence …
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CSP Functional Genomics
… and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily … and track record of the applicant.  Learn about the general review process or find details on the internal … For general questions, please reach out to Christa Pennacchio, …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text … what TFs and regulatory networks are conserved across fungi.” Using multiDAP-seq, Nagy’s team is comparing five … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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Triggering Morel Fruiting
… aims to provide genomic information for every family of fungi. In the following guest piece, JGI user Dr. Tan … and biochemical processes driving the fruiting of soil saprotrophic mushrooms. To date, how the nutritional … decomposition by the black morel, as well as the gene-expression programs encoding the biochemical processes …
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Comparative genomics reveals dynamic genome evolution in host specialist ectomycorrhizal fungi
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Proteome specialization of anaerobic fungi during ruminal degradation of recalcitrant plant fiber
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