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A Plant Root Atlas for Tracking Developmental Trajectories
… single root cells and combining the information with previously published datasets. The work was  recently published in … Phytozome and will be available for future single-cell projects.” The Berkeley Lab  Biosciences Area has been … these efforts, which included two  workshops with resulting reports and a  perspective article . Publication: Shahan R …
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Genomic Standards Consortium Projects
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The Chlamydomonas genome project: a decade on
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Computationally Classifying Fungal Lifestyles
… and feedstocks for biomass and biofuel production. Learning about the ecology and evolution of  Dothideomycetes could … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … the data provided. In this proof of concept test, the team reported that the algorithm was over 95% successful at …
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Parallel Evolution of Nacre Building Gene Sets in Molluscs
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and … than 130 implementation milestones to help track and drive progress toward the overarching goals and vision. The plan … support of our goals,” said Mouncey. “Creating transparency about our efforts is critical for enabling complementary and …
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Single Nucleotide Polymorphism Charting of P. patens Reveals Accumulation of Somatic Mutations During in vitro Culture on the Scale of Natural Variation by Selfing
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… scientists, the culmination of their work into a written report that is published in a scientific journal is the … ultimate achievement. To get to this point requires rigorous research, written skill, above all else, determination. … Grigoriev at the JGI strongly influenced her perspective about what it means to be a scientist. “To see how team …
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A call for standardized classification of metagenome projects
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Data Policy & Support
… … Read more about our data management practices and the resources we …
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Viral Genomics Group
… however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving … Genomics group . Research Team … Coclet, C. and Roux, S. (2021) Global overview and major challenges of host … 4 , 1895–1906 Roux, S. et al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech …
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Genome Project Standards in a New Era of Sequencing
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