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… in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures … genome. Many plant pathogens such as the fungi that cause poplar leaf rust, are rich in transposons, which may help … least one reference genome for every family of fungi, the 1000 Fungal Genomes initiative of the U.S. Department of …

… user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and … 2012 – 2015  Bright Futures Academic Scholarship, 2002 – 2006  HCA Foundation Scholarship, 2002 & 2004  Graduate … the heme-binding split-barrel family. J Biol Chem  300(11), 107888. Grosjean N, Yee EF, Kumaran D, Chopra K, Abernathy …

… order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility … hosts these viruses are likely to infect, and (iii) identifying the genetic traits of the viruses to better … specific database of IMG/VR (Viral Resources.) Launched in 2016, IMG/VR is the largest publicly available collection of …

… switchgrass ( Panicum virgatum ), which has established 10 experimental gardens located in eight states spread … and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … and those previously grown for the DOE candidate feedstock poplar. “You’re collecting natural diversity and you’re …

… the southern California and Mexican coastlines. Roughly 100,000 years later, that Japanese eelgrass crossed the … form of another species, so the scientists had to use the genome itself.   Approximately 67 million years ago, the … Genome Institute Community Sequencing Program (CSP 502951, 2016, Population and evolutionary genomics of …

Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … of these plant genome sequences also led researchers to identify a gene related to seed dispersal in wild populations … agriculture, learning, and commercialization. Opened in 2008, HudsonAlpha’s vision is to leverage the synergy between …

The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, … in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology … Bioinformatic Approach to Discovering Promoters Regulating Poplar Drought Response 7:27 PM Highlights from Genome of …

… in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development … ecogenomics. For this role, Dr. Roux can rely on more than 10 years of expertise in the fields of virus ecology and … viruses of archaea and bacteria. PLoS Biology 21, e3002083 Roux et al., 2021. Ecology and molecular targets of …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … to boost understanding of environmental viruses. In 2016, Nikos Kyrpides at the JGI led a team that combed …

… 2022 marks the JGI’s 25th anniversary. Over the last year, we’ve been revisiting a … a poop sample, or a rumen sample, you’re going to find beautiful diversity.”  Within that diversity of bacteria and … kinds of supplies in the quest to break down plants.  In 2016, her team leveraged transcriptomics and other assays to …