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Ben Bowen
Specializing in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and … the DOE’s Biological and Environmental Research user community in their bioenergy and environmental objectives. … …
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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic reprogramming. The Science If it looks like a duck … microbes, the answer is no. They refer to the infected microbial cells as virocells, a change in name first …
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JGI@25: Building a Better Bean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … of the JGI; and Scott Jackson of the University of Georgia sequenced and analyzed the genome of the common bean. That … farmers and a commercial crop for large producers. The team sequenced and assembled a 473-million basepair genome of the …
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Cultivating Symbiotic Antarctic Microbes
Nanohaloarchaeota cultures reveal they are symbionts and not … cycle. The JGI is sequencing large numbers of microbes and microbial communities that contribute to carbon cycling, and … in understanding the genomic basis and ecological consequences of microbe-microbe interactions. Using metagenomes …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses …
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A Powerful Technique to Study Microbes, Now Easier
Lawrence Livermore National Lab biologist Jennifer Pett-Ridge collaborated with … to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and robots …
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Extracting the Secrets of Secondary Metabolites
CRAGE-CRISPR combo helps further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not … into other bacteria, thereby enhancing the scientific community’s understanding of how secondary metabolites are …
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MycoCosm Tutorial
Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics … interactive web-based tools for comparative genomics and community annotation. Presented by Igor Grigoriev, Steven …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
In April 2020, we mark both the 50th celebration of Earth Day … JGI-supported project studying the world’s rivers and their microbial communities. He’s focusing on the Arkansas River … stressors, um, alter microbial biomass and then what the consequences are for the ecosystem. ALISON:  So, Ed is trying …
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How Microbes Can Protect Plants in Drier Straits
A mini-episode looking at the efforts of Pankaj Trivedi, whose New Investigator proposal was recently approved through the JGI Community Science Program, to use microbiome science to help …
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