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The JGI Data Portal: Improving User Experience
… JGI Data Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal … are more broadly applicable to the download processes from the other JGI Portals, as well. “For thousands of … experience and beginning work on the download experience from MycoCosm and PhycoCosm, with the intent of eventually …
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JGI Early Career Researchers Featured in mSystems Special Issue
… specific metabolic processes. A third approach steps away from reconstructing genomes directly from the environment and focuses on sequence reads to link … has advanced drastically, aided by genome assembly from metagenomes. This is a critical step toward better …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… users — have access to high-quality, assembled datasets from all of this information. The JGI aims to create … has been a collaborative effort. For example, with support from the  Exascale Computing Project , the JGI — along with … a massive metagenome assembly for a time-series experiment from the highly-studied Lake Mendota is told as part of a …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… a close as this previously retired Naval Commander retires from Berkeley Lab. For the last 15 years, Ray Turner has … a close as this previously retired Naval Commander retires from Berkeley Lab. On June 24, in what was billed as a … a mask for Ray to wear and a red carnation lei flown in from Maui, care of the Admin Group’s Terri Bartolome. What …
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UC Merced Interns Reflect on Their JGI Summer Projects
… Over the course of eight weeks this past summer, 10 students from UC Merced worked closely with JGI scientists on … The topics students worked on ranged far and wide — from implementing new data visualization tools, to using …
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DOE Metrics
… Hours reflect a delay in implementation of the LIMS from Q2 to Q3. As a result of the delay in the LIMS …
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A Mentor’s Perspective on Training the Next Generation
… Over the years, hundreds of interns have come to the JGI from all parts of the globe to gain lab experience and …
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Back in the Lab: the 2023 Summer Intern Experience
… work, but the opportunity to collaborate with and learn from fellow researchers onsite as well. …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
… how viruses impact the release of greenhouse gases from Arctic permafrost. But to see what they’re doing, he …
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Filling in the Plant Tree of Life
… and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. One project …
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IMG/VR
… of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to …
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JGIota: Looking Back at Sequencing for Soybeans
… threatens this important crop. Hear more about that work from researchers Gary Stacey (University of Missouri), Peter …
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