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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… This series is the story of a giant metagenome assembly from Wisconsin’s Lake … program MetaHipMer2. Oak Ridge National Lab is home to two supercomputers — Summit and Frontier — that process … capable of running smaller assemblies — so we head there for a sense of what this supercomputing looks like. …
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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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What Happens To a Rainforest When You Dial Up Drought?
… Rainforests store a big fraction of all the carbon on Earth, and … soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, researchers take a look at …
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The Structure of CcmP, a Tandem Bacterial Microcompartment Domain Protein from the β-Carboxysome, Forms a Subcompartment Within a Microcompartment
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Graduate Students Get Thesis Research Opportunity at the JGI
… Twice a year, the DOE Office of Science Graduate Student Research (SCGSR) program … to answer our most pressing problems. I’m very much looking forward to working with JGI and LBNL scientists and have … JGI-UC Merced Internship Program was developed between the two institutions to help train the next generation …
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Crops as Tough as World Cup Turf
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the … with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of this … occupy more space on Earth than any other ecosystem. Therefore, understanding the microbial activity that dominates …
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JGI@25: Solving the Mystery of the Missing Oil
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … Lab) were on the scene collecting samples. Terry Hazen, a former Berkeley Lab environmental biologist and current … Jansson is currently Chief Scientist for Biology in the Biological Sciences Division and a Laboratory Fellow at the …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny … of binning methods, we were able to recover Olpidium sequences from the “contaminated” genome data with strong …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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Detection of short-term cropping system-induced changes to soil bacterial communities differs among four molecular characterization methods
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Contrasting Community Assembly Forces Drive Microbial Structural and Potential Functional Responses to Precipitation in an Incipient Soil System
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