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… Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s … projects through implementation of advanced analysis pipelines and tools as well as development and implementation of …

… Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at …

… Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers focused on … framework provided by these high quality reference genome sequences could help researchers better understand related …

… Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Yeast strains engineered for the biochemical conversion of glucose to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two … Molecular Sciences Laboratory (EMSL) and the  DOE Joint Genome Institute (JGI)—have selected 11 proposals for … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… (a marmot!) as they’ve sampled the microbial communities living in the mountaintop lakes of the Sierra Nevada mountains. These lakes are …

… Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer through the waters … they encompass a wide range of ecosystems ranging from wetlands to tree islands to cattails. In 2018, the US …

… Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 … than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key role in determining the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download experience … databases and tools,” noted  Kjiersten Fagnan , JGI’s Chief Informatics Officer. JGI’s Portals, including Phytozome , …

… For the first time in several years, the DOE Joint Genome Institute hosted several UC Merced students this … mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein Bendall and …

… In the summer of 2015, Adam Session was a postdoc working at … and the  oilseed crop false flax – genomes that have been sequenced by the JGI – and the common strawberry, which is … clearly identifies the four subgenomes based on non-genic sequences.”  In his words, the history of the strawberry is …

… Multiple 2021 HPCwire Awards ” on the Berkeley Lab Computing Sciences site. Lawrence Berkeley National Laboratory … Lab), the National Energy Research Scientific Computing Center (NERSC), the DOE Joint Genome Institute (JGI), and the Energy Sciences Network … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …