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Reconstructing each cell's genome within complex microbial communities—dream or reality?
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Genome size, cell size, and the evolution of enucleated erythrocytes in attenuate salamanders
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Genomes of Three Methylotrophs from a Single Niche Reveal the Genetic and Metabolic Divergence of the Methylophilaceae
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MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
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Patterns of genomic variation reveal a single evolutionary origin of the wild allotetraploid Mimulus sookensis
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Kanwar Singh
… part of his time assisting JGI users by processing their single cell samples using our high throughput pipeline. He also explores new methods for creating sequencing libraries and optimizing various processes. …
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Marine Microbe Contains Multitudes
… periodically at different depths. In order to determine the genome structure of SAR324 cells and their gene expression, the team then sequenced … metatranscriptomes), as well as the genomes of single cells of the uncultivated SAR324. The constellation …
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Synthetic Biology Lab
… as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … mining and sequence design with scaling the production of large, difficult to synthesize constructs such as those … methods for efficient QA/QC based on next-generation sequencing technologies including PacBio and Illumina.  The …
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The Case for Conservation
… moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single set of chromosomes, are available. The genome … comes from finally having an answer to the question, “Why bother keeping this?” For Stuart McDaniel’s lab at the …
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JGI@25: Strengthening Soybean
… impressive environmental and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has … was just like rediscovering genetics, with the evolution of sequencing technologies and the evolution of …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass  … Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into how the multiple …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting researchers to apply for … will be competitive. Q:  Can you elaborate on the single-cell genomics capabilities? A:  EMSL’s capabilities include … to their resources. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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