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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… genomics and multi-omics work. Recordings and recaps of all three keynote talks follow, starting with Bruce Hungate. … organisms can do. And we need the field’s context to see why it matters.” As his career progressed, Hungate has … these amazing technologies that the JGI has to identify and sequence who’s making what, that the context at a microscale …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… to look at how this enzyme family evolved across 90 species. “One unique thing about this work was our focus on … to the way many organisms function, they have a sense of why nitrogen metabolisms can be so varied.  As evolution has … different Swiss Army knives — explaining a bit more about why and how nitrogen metabolism is so robust and varied.  …
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Complete Genome sequence of Burkholderia phymatum STM815T, a broad host range and efficient nitrogen-fixing symbiont of Mimosa species
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JGIota: The Algae Nicknamed ‘Chlamy’
… UC Berkeley plant biologist Sabeeha Merchant explains why she works on this alga, how researchers managed to sequence its genome, and what it has to teach us about other …
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Plant Microbial Interactions Group
… multipartite phenomenon in additional plant and bacterial species of bioenergy importance. …
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Improving the Cacao Genome and Phytozome
… to climate change and devastating fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years … through the Cacao Genome Database project. The genome sequence was assembled by the plant team at the  HudsonAlpha …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of the terpene synthase gene … revealed the largest number of TPS genes of any currently sequenced plant, a number closely followed by E. globulus . … list of putative genes from C. citriodora to known TPS gene sequences from Eucalyptus species and other plants. The …
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The Power of One, Amplified
… community was similar across sequencing approaches, that species specific sets of single cells harbored mobile … snippets of microbial genomes directly from environmental sequence data, by piecing each genome together from large … variation within natural microbial populations. Each of the three sequencing approaches produced a generally similar …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… of defense mechanisms. The Impact There are over 10,400 species of ferns alive today. Boasting adaptations in order … power of plants, and the lessons they can teach us, are why the U.S. Department of Energy (DOE) Joint Genome … richardii marks the first published manuscript of a genome sequence generated through the OGG. For a long time, C-fern …
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Revisiting the sequencing of the first tree genome: Populus trichocarpa
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… the effects of radiation exposure to human health. Three DOE national labs had people and resources focused on … Center, JGI staff worked around the clock to generate the sequences of these three chromosomes. In 2004, they published the sequences of these three chromosomes. These sequences …
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Eelgrass Proves to Be Much Younger Than We Thought
… Summary Eelgrass is unique in that there are not many species able to occupy the regions where eelgrass … locations.  One group investigated changes in protein sequences, while others analyzed single point mutations … Facility at Lawrence Berkeley National Laboratory, provided sequence resources — including the eelgrass genome assembly …
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