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Dominant nitrogen metabolisms of a warm, seasonally anoxic freshwater ecosystem revealed using genome resolved metatranscriptomics
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… impacts, carbon cycling, and the microbial dynamics in freshwater lakes over a several year period.” “We’ve been …
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Webinar: MycoCosm Tutorial
… JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … ) on PhycoCosm tree with several sequenced genomes. 2.  Q: How exactly EcoGroups are built? … or PhycoCosm. At the moment there is no DOE mandate to sequence more Amoebozoa, but we are open to a dialogue about …
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Members of the Genus Methylobacter Are Inferred To Account for the Majority of Aerobic Methane Oxidation in Oxic Soils from a Freshwater Wetland
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JGI-USCCN Strain Sequencing Opportunity
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JGIota: The Algae Nicknamed ‘Chlamy’
… UC Berkeley plant biologist Sabeeha Merchant explains why she works on this alga, how researchers managed to sequence its genome, and what it has to teach us about other …
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Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701T) and emended description of the genus Thermanaerovibrio
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Short sequence motifs, overrepresented in mammalian conserved non-coding sequences
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Virus Discoveries that Keep Getting Bigger
… Sequence-based studies — from metagenomics to single-cell … of these approaches. One way of detecting giant viruses in sequence data is read-mapping: using giant virus reference … team used this approach to deliver novel viral genomes from freshwater, sewage, and marine samples. In addition to …
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Introduction: Sequences and consequences
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Targeted single‐cell sequencing
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JGIota: Sequencing Shiitakes with David Hibbett
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