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… discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on … and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other projects in the group include … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et …

A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids … elements like viruses spread their DNA, they can affect how microbes cycle nutrients and adapt to climate change. …

… fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a … these results validate how mycorrhizal fungi play an integral role in soil carbon storage. Summary There are … relationships outside of the root cells) lineages. To learn why, researchers analyzed 135 fungal genomes representing …

Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI …

Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … the Korarchaeota, one of which contains genes for both sulfur and methane metabolism. The newly described …

CheckV can help researchers assess virus sequence fragments and data quality. The Science Through … have now developed CheckV (pronounced “Check-Vee”) to help researchers assess and improve the quality of metagenome-assembled viral genomes . The Impact The microbes that play key roles in cycling nutrients such as …

Below are a list of webinars that can help you through the submission process … here . You can find additional webinars covering how to use our data portals here.  … … Shining a Light: Advanced Photon Source Capabilities for FICUS Research shows researchers …

… for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user facilities—the  Environmental Molecular Sciences Laboratory (EMSL) and the  DOE Joint Genome Institute (JGI)—have … particularly, what happens in the rhizosphere where plants, microbes and soil interact below the ground, influencing the …

Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were sequenced by the JGI (isolates here , here and here ), and the data has been used to better understand arsenic mobility and to better …