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… Sequencing technology has changed dramatically over the last  … before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost 717 trillion. Last … ecologist and JGI user Trina McMahon has been sampling microbes at Lake Mendota, which borders the University of …

… The practices that support agriculture – such as efficiently using dwindling water resources and restoring and maintaining … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …

… A “bait and hook” single-cell genomic approach to … Lab). Using a single-cell screen, they can now identify microbes with specific functional characteristics. When they … bacterium typically found in low abundances. The Impact Microbes are known to be key contributors to the planet’s …

… Though visible to the naked eye, microscopy reveals unexpected complexity At first glance, the slightly murky waters in the tube look like a scoop of stormwater, complete with … the bacterial cells on the molecular level. They amplified, sequenced and assembled the genomes. In parallel, Gros’ lab …

… Large-scale comparative analysis leads to identification of … planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the … Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI …

… The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together established and emerging scientists from …

… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, … data, open to all researchers. Book a session via the appointment calendar for technical help, feedback or a guided …

… In a special issue of mSystems , out May 14, 2019, JGI … outline more targeted approaches to reconstruct individual microbes in an environmental sample beyond the … recent Nature Communications paper, uncovering giant virus sequences in soil for the first time. A second approach …

… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, biochemicals and other … Program aims to generate large datasets to explore sequence-function relationships, advancing the discovery of …