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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of … access to cutting-edge cell sorting, DNA amplification, and sequence analysis to recover the genomes of uncultivated … now uses laser microdissection to selectively isolate and sequence microbial aggregates after first imaging with …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
Congratulations to Susannah Tringe , one of eight scientists and … Tringe, a microbiologist, was recognized for “advances in sequence-based studies of microbial assemblies, revealing … cycling, in interactions with plants, and as drivers of methane production, nutrient cycling, greenhouse gas …
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Overview of the Genomes OnLine Database (GOLD)
TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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Hiroshi Otani
Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, … is particularly interested in understanding how, when and why microbes decide to produce which metabolites. … BS, …
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global … Berkeley National Laboratory (Berkeley Lab) has now sequenced and assembled the genomes of these five cotton … insights on crop improvements at a genetic level, including why having multiple copies of their genomes (polyploidy) is …
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management … and particularly those in processing (metabolizing) methane within the Florida Everglades ecosystem. There are … samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed the soil samples, the JGI offered 7 …
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Virulence of banana wilt-causing fungal pathogen Fusarium oxysporum tropical race 4 is mediated by nitric oxide biosynthesis and accessory genes
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at … on that. “The purpose of this CSP is to better understand methane cycling in mangrove wetlands in south Texas,” he … CSP, but also look at how viruses might be influencing the methane cycling within these mangrove wetlands.” A chapter …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
A nuanced understanding of peat moss drives insight into … Laboratory, and the HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team … and others that preferred the hollows. Those genome sequences showed not only that the sex of a sphagnum plant …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user … in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, … basis of their behavior in the environment.  The JGI genome sequences and metabolomes of microbes and microbial …
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JGI Accepts 17 Proposals for Community Science Program
Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of … collaboration that produced the reference genome sequence for Eucalyptus grandis. Accessing recently burned … a full-scale submission. She aims to look at the microbial methane cycle in terrestrial geothermal environments. …
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H2-saturation of high affinity H2-oxidizing bacteria alters the ecological niche of soil microorganisms unevenly among taxonomic groups
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