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The microbiome of a bacterivorous marine choanoflagellate contains a resource-demanding obligate bacterial associate
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
Gardeners and farmers around the country recognize that crop … (Berkeley Lab), has produced a high-quality reference sequence of the complex switchgrass  genome using samples … many parts of the country also helped the team understand why some switchgrass plants from the Northeast have traits …
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Community Science Program
The Community Science Program (CSP) provides the scientific community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to … of our CSP: The Large Scale call is for expansive projects that leverage a range of JGI capabilities, and also requires …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together …
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Complete Genome Sequence of Nitrobacter hamburgensis X14 and Comparative Genomic Analysis of Species within the Genus Nitrobacter▿ †
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Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (HT), and emendation of the species Turneriella parva
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global … Berkeley National Laboratory (Berkeley Lab) has now sequenced and assembled the genomes of these five cotton … insights on crop improvements at a genetic level, including why having multiple copies of their genomes (polyploidy) is …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Proposals aim to sequence and annotate genomes from Antarctica to … microalgae, or diatoms. Through the Tara Oceans Expeditions that took place between 2009 and 2013, the  Chaetoceros … provide more information on these ecologically relevant species. Another focus area was inter-organismal …
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The obligate alkalophilic soda‐lake fungus Sodiomyces alkalinus has shifted to a protein diet
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The More the Merrier: Making the Case for Plant Pan-genomes
Brachypodium model system traces polyploid genome evolution. … short life cycles and can be easily transformed, traits that make them easy to work with bioinformatically and in the laboratory. “We are fortunate because the progenitor species of  Brachypodium hybridum are still extant (whereas …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in wild … National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and released a … Kellogg added, and shattering genes may be specific to species or groups of species.  The genome data also revealed …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
Accepted proposals emphasize JGI interests in algae and … Initiative. Brassicales is represented by more than 4,700 species, and the proposal focuses on investigating the … to as natural products, the proposal includes plans to sequence several thousand Actinobacteria strains and then …
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