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Fungal Friends or Foes in Plant Roots
Institute for Plant Breeding Research (MPIPZ) studied how fungi associate with roots in A. thaliana plants. The … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … . The work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s Francis Martin that …
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JGI@25: Using Team Science to Build Communities Around Data
… we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … Genomes (1KFG) Project through a 2012 Community Science Program proposal. Joseph Spatafora of Oregon State … genomes in progress and 200 that are pending samples from users. Roughly 300 have been published. Spatafora said the …
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Natural Prodcast Episode 23: Aaron Puri
… now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for me keeping myself on … of Utah in the Department of Chemistry. So welcome. DAN: How do we introduce Aaron? JACKIE: How would you like to be … microbes are interacting with each other from sequence information. DAN: Very cool. What have you learned? AARON …
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How to Target a Microbial Needle within a Community Haystack
Microbiology has developed, tested and deployed a pipeline to first target cells from communities of uncultivated … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … was enabled by the JGI’s  Emerging Technologies Opportunity Program . The ETOP helps researchers develop technology that …
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The JGI Data Portal: Improving User Experience
… human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI … data, the team noticed that a large percentage of Phytozome users who were seeking to download all the data associated … for various data types or taxa An at-a-glance view of how much data you’ve selected for download, as well as …
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JGI Portals
… developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes … … GOLD is a web resource for comprehensive access to information regarding genome and metagenome sequencing … new data for use by scientists and the public, and provide programmatic access to all sequence and annotation data and …
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Introducing New Members of the JGI User Executive Committee
The JGI welcomes three new members to the JGI User Executive Committee (UEC) : Roland … but use-restricted] exist on [the JGI data portal] IMG or how to deal with situations in which they inadvertently …
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Sequencing Technologies
The Sequencing Technologies Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological discovery by the JGI and external DOE users. Adopting the latest  sequencing technologies has …
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From Competition to Cooperation
… broader analysis than had ever been done before to look at how multiple forest fungi have independently evolved to … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Interfaces Scientific Focus Area in the Genomic Science Program, the Office of Biological and Environmental Research …
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Yeasts and how they came to be
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Cataloging the Microbes that Manage the Health of River Systems
States. They also provided multiple access points to the information. The team harnessed a community-science program to collect samples from across the country to … not only how researchers can successfully partner with DOE user facilities and resources on such large-scale multi-omic …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and … completing the human genome, the JGI became a national user facility. The staff and resources shifted to offering …
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