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Fungal Friends or Foes in Plant Roots
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … . The work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s Francis Martin that contributed … (DOE) Joint Genome Institute, a DOE Office of Science User Facility, and supported by the Office of Science of the …
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From Competition to Cooperation
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy Joint Genome Institute, a DOE Office of Science User Facility, and supported by the Office of Science of the … Interfaces Scientific Focus Area in the Genomic Science Program, the Office of Biological and Environmental Research …
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iPHoP: A Matchmaker for Phages and their Hosts
… prediction approaches, researchers have created a new program called iPHoP (pronounced “eye-pop”,  freely … nutrient cycling, or carbon sequestration. Summary Existing programs use a variety of approaches to match a virus with a … of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, …
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Nigel Mouncey
… and position JGI as a leading integrative genome science user facility.  In addition to serving as JGI Director, Dr. … Nigel Mouncey is the Secondary Metabolites Program head as well as our JGI Director. Click to learn more about the program's areas of focus, major initiatives and more.  …
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Viral Genomics Group
… as metagenomics and metatranscriptomics provide invaluable information on virus diversity and activity in microbial … annotation and functional prediction for phage proteins user-friendly integrated pipelines (MVP) and databases … Roux, S. et al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG). …
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Open Frameworks Training the Next Generation of Scientists
… of faculty and researchers describe a workforce development program for higher education that develops skills in fungal … DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, and the DOE Systems Biology Knowledgebase … in mycology and microbiome science, respectively. These programs are resources designed to prepare early career …
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Better Genome Editing for Bioenergy
… Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica is a tantalizing microbial … is actually essential. Through the JGI’s  Community Science Program , the scientists thus set out to identify which … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under Contract No.  …
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Plant Microbial Interactions Group
… experimental characterization methods, in addition to bioinformatics tools to elucidate phage function in this … (Tokyo University) Dongfong Wang (Spelman University, VFP Program) Emerald Nash (UC Merced Intern) Tyrome Sweet (UC …
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MicroSyn: A user friendly tool for detection of microsynteny in a gene family
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Environmental Genomics Group
… metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We … of hard-to-culture microorganisms. This process enables our users to explore the genetic makeup of microbial … interactions, evolution, and adaptation, ultimately informing strategies for environmental monitoring, …
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Natural Prodcast Episode 3: The Primer, Part 3
… and it’s a little hard to find in print, but we live in the information age and the ebook version is available at most … we need partners. And so the Secondary Metabolites Science Program is three people! We’ll use a lot of the technology … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Lab. You …
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How Filamentous Fungi Sense Food
… these fungi detect which complex chains are available; this information triggers pathways to determine which enzymes … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … work was enabled in part through JGI’s Community Science Program through a proposal akin to the Encyclopedia of DNA …
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