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The integrated microbial genomes system: an expanding comparative analysis resource
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Mining Metagenomes for Cas Proteins
… molecules broadens the range of applications for CRISPR-Cas systems. It also underscores the untapped potential waiting … proteins and were also found next to cas1 genes. Further analysis led to the identification of a new family of Cas … and Nanohaloarchaea. This work represents an excellent showcase of the unique capabilities provided from …
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A Plant Root Atlas for Tracking Developmental Trajectories
… the  Arabidopsis root, profiling nearly 100,000 single root cells and combining the information with previously … datasets. The work was  recently published in the journal  Developmental Cell and provides a community resource that could help … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Offerings & Capabilities
… and other data produced at scales amenable to statistical analysis. To meet these needs, the JGI deploys … sequencers and platforms dedicated to synthesis, single-cell analyses and metabolomics. At the same time, the team …
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Development of a clostridia-based cell-free system for prototyping genetic parts and metabolic pathways
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Development of an orthogonal fatty acid biosynthesis system in E. coli for oleochemical production
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Natural Prodcast Episode 22: Alison Narayan
… can it actually turn over? ALISON NARAYAN: So that’s an excellent question. I think that we need enzymes with good … thanks so much for talking to us today. This is really an excellent conversation. I’m so happy we did this. ALISON …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… of achieving a predictive understanding of biological systems. “If we could model the genome as if it were a … understanding of patterns in large complex data, the JGI’s development of GenomeOcean supports the DOE Biological and … biosynthetic gene cluster data set through the JGI's Secondary Metabolite Collaboratory . In addition to the …
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Ten Years of Maintaining and Expanding a Microbial Genome and Metagenome Analysis System
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Searching for fat tails in CRISPR-Cas systems: Data analysis and mathematical modeling
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Cell by cell: population genetics in the wild
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… is found in nearly all types of bacteria and interacts with cell signaling networks that control many basic cellular functions. It plays an important role in regulating microbial cellulose production and biofilm formation, which affects a …
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