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Comparative genomics reveals electron transfer and syntrophic mechanisms differentiating methanotrophic and methanogenic archaea
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Physiological potential and evolutionary trajectories of syntrophic sulfate-reducing bacterial partners of anaerobic methanotrophic archaea
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help or harm … if these fungi act as friends or foes. The Impact Microbial communities comprised of fungi and bacteria can thrive in … on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled a mycobiome culture …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… for our 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped by dam … mats — to reveal how these systems adapt and contribute to global biogeochemical cycles. Additional …
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Natural Prodcast Episode 17: Cassandra Quave
… find me. And really it was my third grade science fair project where I first looked into a microscope and just fell … things, because a lot of what we do at JGI in terms of the sequencing that we do is very people-disconnected, and … QUAVE: So the other thing that we do on the ground with the communities themselves is really think about what are their …
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JGI Accepts 17 Proposals for Community Science Program
… Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals … University and colleagues are interested in the microbial communities that live on Alaska’s glacially dominated Copper …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial diversity is … falls within that single beam. When it comes to microbial communities, scientists have historically been unable to see … replicating a whole community is impossible.  Metagenomic sequencing allows researchers to study the entire genetic …
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Katherine Louie
… where she manages metabolomics production for community sequencing projects and heads R&D efforts to expand the metabolomics … for helping identify active micro-organisms within complex communities, and custom software for integrating … Johns Hopkins University; Ph.D. in Bioengineering, Arizona State University …
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Next generation sequencing data of a defined microbial mock community
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The genome of Syntrophorhabdus aromaticivorans strain UI provides new insights for syntrophic aromatic compound metabolism and electron flow
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In depth metagenomic analysis in contrasting oil wells reveals syntrophic bacterial and archaeal associations for oil biodegradation in petroleum reservoirs
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First Monoploid Reference Sequence of Sugarcane
… Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple … genomic breeding in these crops. For diploid species, sequencing programs generally focus on a genotype with two … The JGI sequenced half of the 4,500 BACs sequenced for this project that were colinear to the gene-rich part of sorghum …
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