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… (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … as assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI together aim to publish the first analysis of data produced at the facility, provided this is done in a …

New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main … called lignocellulose, are the primary components of hardy cell walls. It’s the cellulose and hemicellulose … Centers, the Joint BioEnergy Institute and the Great Lakes Bioenergy Research Center. O’Malley is also affiliated …

… researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … protein-coding genes belonging to each genome. The final dataset – available to the research community on an online … Fermentation Explorer ( GitHub ) with a series of large datasets. One test was to predict traits of more than 400 …

… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … and his colleagues developed first worked on a reference dataset that included genome sequences known to be … combed through more than 70,000 microbial and metagenome datasets, ultimately identifying more than 10,000 …

Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering … The team also provided several access points for these datasets. As part of a larger microbiome data integration …

… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets to maximize returns on these advances. Over the … out the onerous SIP sample processing. Generating these datasets opens up the possibility of new insights across …

A preview of how large-scale single cell genomics complements … A single sample was then used to produce a paired amplicon dataset (a.k.a. 16S rRNA gene sequencing), a shotgun metagenome, and a single cell dataset of nearly 500 single cell genomes. The single cell …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and you’re listening to the second episode of the Natural Prodcast. This is part 2 of our “primer” …

For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … is a superorganism: one being that is actually comprised of two (or more) participants. One is a fungus (usually … data portal … Alga Genome on PhycoCosm data portal … Datasets … Datasets …

See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the …