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Behind the Paper: Hot Springs Metagenomics
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Microbial Genomics & Metagenomics (MGM) Workshop
Registration has closed.  The U.S. Department of Energy (DOE) Joint … Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This highly hands-on workshop is designed to familiarize users with the …
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A Bioinformatician's Guide to Metagenomics
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… polar oceans give rise to some of the largest food webs on Earth. And at their base are microscopic, photosynthetic … algae. But human-induced climate change , a new study suggests, is displacing these important cold-water communities of algae with warm-adapted ones, a trend …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake … this project. But every part of this project depends on lakewater samples — so this episode is a look at how researchers …
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Metabolomics Program
… metabolites, genes, and proteins. It also enables exploration of energy and nutrient exchange, as well as microbial and … to environmental changes. With advanced mass spectrometry techniques and computational tools, the program supports … health, and bioenergy development. … EcoFABs:  For studying microbe-host (or plant-microbiome) interactions …
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Ecosystem Fabrication (EcoFAB) Protocols for The Construction of Laboratory Ecosystems Designed to Study Plant-microbe Interactions
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VISTA Region Viewer (RViewer)—a computational system for prioritizing genomic intervals for biomedical studies
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Fungal ecological strategies reflected in gene transcription ‐ a case study of two litter decomposers
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Natural Prodcast Episode 15: Katherine Duncan
… … Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk … I wouldn’t say I was one of these people that wants to study oceanography and was fascinated by the oceans, though … or some people. But you’ve got a lot of data on that technique. And I find that really interesting– not that I …
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Matthew Kellom
Matt is broadly interested in the interactions between microbial life and environment, and using metagenomics to study these complex natural systems. Microbial communities … also supports various CSP and FICUS user projects for the Metagenome Program. …
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Understanding Wildfire Recovery, Starting in Soil
… a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way for future plants and trees … genes with functions useful for forest recovery, this study sheds light on how microbes contribute as a forest … a wildfire. The Impact Healthy forests store carbon, filter water, and support all kinds of plants and animals, but with …
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