Results

ShotgunFunctionalizeR: an R-package for functional comparison of metagenomes
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Advancing Genome-Resolved Metagenomics beyond the Shotgun
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Illuminating the Virosphere Through Global Metagenomics
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A pipeline for targeted metagenomics of environmental bacteria
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CoverM: Read alignment statistics for metagenomics.
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Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil
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The Airborne Metagenome in an Indoor Urban Environment
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Zhong Wang
Research in the Analysis R&D group focuses on developing new bioinformatics solutions to support JGI in … analyses, next-generation transcriptome de novo assembly, metagenome and metatranscriptome assembly, Hadoop based on … scale data analysis in the cow rumen and sheep rumen metagenome projects. Standing at the intersection between …
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Systematic Identification of Gene Families for Use as “Markers” for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups
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Global Diversity of the Brachypodium Species Complex as a Resource for Genome-Wide Association Studies Demonstrated for Agronomic Traits in Response to Climate
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Genome-Wide Association Studies across Environmental and Genetic Contexts Reveal Complex Genetic Architecture of Symbiotic Extended Phenotypes
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Data Ecosystem
… specifically optimized for high-performance computing environments. … KBase is a critical partner in enabling systems … analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek … scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI …
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