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Use of Agrobacterium rhizogenes Strain 18r12v and Paromomycin Selection for Transformation of Brachypodium distachyon and Brachypodium sylvaticum
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Rapid selective sweep of pre-existing polymorphisms and slow fixation of new mutations in experimental evolution of Desulfovibrio vulgaris
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JGI User Executive Committee Expands
… decomposition. She’s also participated in the 1000 Fungal Genomes Project and has an interest in cross-disciplinary … sustainability challenges. She’s worked with the JGI on poplar and sorghum projects, specifically for generating …
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A Grass Model to Help Improve Giant Miscanthus
Understanding the evolution of polyploidy, and how genomes respond to extra chromosome and gene copies, will … Miscanthus breeding programs. The team also sequenced genomes of numerous wild Miscanthus lineages to better …
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Data Ecosystem
… data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI and …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
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Genome‐wide scans of selection highlight the impact of biotic and abiotic constraints in natural populations of the model grass Brachypodium distachyon
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Mesophilic and Thermophilic Conditions Select for Unique but Highly Parallel Microbial Communities to Perform Carboxylate Platform Biomass Conversion
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Natural Prodcast Episode 5: Brad Moore
Sequencing Program, and they worked with us to sequence two genomes. Those were of Salinospora tropica and arenicola . … like, you know, at that time, there are only two sequenced genomes of a Streptomyces , or gram-positive high GC … a year or two ago, with the possibility of doing 10 seaweed genomes . At that time, I believe there were probably only a …
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The More the Merrier: Making the Case for Plant Pan-genomes
… the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids with two … flowering plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many genes after such events, returning their genomes to a diploid state while retaining multiple copies …
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Natural Prodcast Episode 18: A CSP Primer
… for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. So for fungal and for a lot of our eukaryotic genomes, all our eukaryotic genomes. Fungal plant, algal … change over time, if I constantly give it this kind of selection pressure really. And we have pipelines for that. …
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Natural Prodcast Episode 23: Aaron Puri
And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that really got me into that because we had these new genomes that JGI had sequenced that were of these bacteria …
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