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Into the darkness: the ecologies of novel ‘microbial dark matter’ phyla in an Antarctic lake
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NMPFamsDB: a database of novel protein families from microbial metagenomes and metatranscriptomes
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… are now getting more complete genomic results from single cells. The Science Studying the  genomes of microorganisms … do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists usually employ two … and evenly covered genomes when tested in human cells. To see if this method could also improve genome recovery in …
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Strain Engineering
… integrated into a taxonomically diverse suite of microbial chassis strains for elevated opportunity for …
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Laminarin stimulates single cell rates of sulfate reduction whereas oxygen inhibits transcriptomic activity in coastal marine sediment
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How Filamentous Fungi Sense Food
… decide on the order in which this fungus breaks down plant cell wall materials including lignin, cellulose and … (ENCODE) project, which is aimed at determining the activity, expression and regulation of protein-coding genes. … Academy of Sciences . Researchers applied multiple omics techniques to reconstruct and model the gene regulatory …
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Small cells with big secrets
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of … In order to determine the genome structure of SAR324 cells and their gene expression, the team then sequenced … University of Hawaii at Manoa — and colleagues were able to see that SAR324 was made up of four ecologically distinct …
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Rearrangement of a Large Novel Pseudomonas aeruginosa Gene Island in Strains Isolated from a Patient Developing Ventilator-Associated Pneumonia
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… page of that book. Published online September 28, 2022, in Cell , a team led by researchers at Tel Aviv University in … virus snowflakes in the snowstorm of genomic data involved developing special computational sieves to filter out … metatranscriptome datasets from the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) system. “We then …
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Prokaryote Program User Advisory Committee
… on the effective management and strategic objectives of the microbial and metagenome programs and report back to them. …
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Simon Roux
… Program. His responsibilities include the development of novel computational tools to identify virus sequences, the … in collaborative, interdisciplinary research focused around developing foundational knowledge of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research …
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