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IMG/M: the integrated metagenome data management and comparative analysis system
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A k-mer-based approach for phylogenetic classification of taxa in environmental genomic data.
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You Can Move, But You Can’t Hide
Researchers at the JGI develop a tool to quickly and accurately … and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found … software tool  recently described in  Nature Biotechnology  called geNomad identifies and classifies MGEs based upon …
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PEATmoss (Physcomitrella Expression Atlas Tool): a unified gene expression atlas for the model plant Physcomitrella patens
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Synthetic Biology Lab
The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology applications group. The DNA … the broader community.  We focus our efforts on integrating database mining and sequence design with scaling the …
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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of … the quality of single-cell genomes and directly link functional information with individual cells. Research Team    … …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
As SIP experiments shed more light on microbial communities … quantitative SIP analysis as a capability in proposal calls to the U.S. Department of Energy (DOE) Joint Genome …
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Genome‐wide associations with flowering time in switchgrass using exome‐capture sequencing data
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The BioMart community portal: an innovative alternative to large, centralized data repositories
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Nontargeted virus sequence discovery pipeline and virus clustering for metagenomic data
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Combining Hadoop with MPI to Solve Metagenomics Problems that are both Data- and Compute-intensive
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iVirus 2.0: Cyberinfrastructure-supported tools and data to power DNA virus ecology
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