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Environmental Genomics Reveals a Single-Species Ecosystem Deep Within Earth
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Raman-based sorting of microbial cells to link functions to their genes
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… are now getting more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for … they found most bacterial genomes from water and soil communities were at least 80% complete when studied with …
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Doubling Down on Known Protein Families
… with a flashlight, only able to clearly identify what falls within that single beam. When it comes to microbial … of scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … within them cannot be cultivated in lab settings. Since each microbial community has its own unique makeup of …
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Cell by cell: population genetics in the wild
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A Grass Model to Help Improve Giant Miscanthus
… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … simpler (and smaller) models, Miscanthus has a large and complex genome whose evolutionary history and perennial … Biotechnology. Most plants are diploids with two copies of each chromosome, one inherited from each parent. Some …
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JGI Early Career Researchers Featured in mSystems Special Issue
Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … uses fluorescence-activated cell sorting (FACS) to sort cells into several small pools before sequencing to recover … metabolic processes. A third approach steps away from reconstructing genomes directly from the environment and …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… archaea and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes … noted study senior author  Tanja Woyke , who heads JGI’s  Microbial Program . The team mined more than 8,500 publicly … Lake Lanier were of particular interest. Sifting Out and Reconstructing Virus Genomes Much of what is known about the …
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The complex polyploid genome architecture of sugarcane
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Frederik Schulz
Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of … program on agnostic pathogen detection and surveillance in complex samples. … B.Sc. Biochemistry, University of Applied … academic achievements (2008) … Education … Selected Publications … Awards and Service …
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Complete Genome Sequence of Nitrobacter hamburgensis X14 and Comparative Genomic Analysis of Species within the Genus Nitrobacter▿ †
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A bacterial pioneer produces cellulase complexes that persist through community succession
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