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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … with DOE mission-relevant projects that call for expansive sequencing, synthetic biology, and metabolomics capabilities … JGI and the Molecular Foundry.  Submission Deadline Feb 19, 2026 (Proposals due 4/30/26) April 9, 2026  11:59pm PT  Sep …
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Mapping N-Linked Glycosylation Sites in the Secretome and Whole Cells of Aspergillus niger Using Hydrazide Chemistry and Mass Spectrometry
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Uncovering Novel Genomes from Earth’s Microbiomes
… metabolites for multiple applications. Despite advances in sequencing technologies and computational methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … laboratory conditions, their genomes can’t be sequenced using traditional approaches. Identifying and characterizing …
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Game On: High School Students Drive Everglades Metagenomics Study
… soil sampling in the Florida Everglades to help train the next generation of scientists. She shares her thoughts about … email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy (DOE) … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Rapid Quantification of Mutant Fitness in Diverse Bacteria by Sequencing Randomly Bar-Coded Transposons
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CSP New Investigator Call
… an unlimited number of proposals).  For accepted proposals, sequencing, synthesis, metabolomics and analysis will be …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … this phenotype.’”  Results from A “Massive Amount” of Sequencing  Seed dispersal is critical for plants in the … de novo, which let the team look at presence/absence of whole genes,” Kellogg agreed. “Getting that information is …
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Whole genome sequence, CAZyme repertoire and sugar metabolic model of the phytopathogenic fungus Kretzschmaria zonata GFP 132
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida … cattails. In 2018, the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … assembly, and even an introduction to data analysis using the  IMG/M system . A Comprehensive Learning …
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Generation of Long Insert Pairs Using a Cre-LoxP Inverse PCR Approach
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… single-molecule, long-read DNA sequences to aid with genome assembly and transcriptome analysis of microbial, … submit?  How deeply are metagenomes sequenced? A:  For the next call ( CSP New Investigator ), up to 4 long-reads … depth required). Methylation detection currently only works using subread data, PacBio is working on support to use CCS …
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