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Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
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Evolution of zygomycete secretomes and the origins of terrestrial fungal ecologies
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Novel bacterial clade reveals origin of form I Rubisco
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Extent and Origins of Functional Diversity in a Subfamily of Glycoside Hydrolases
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IMG/VR v3: an integrated ecological and evolutionary framework for interrogating genomes of uncultivated viruses
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Taking Stock of the Known and Unknown Microbial Space
… technologies have led to an abundance of microbial genomes becoming available to the global research … a census of publicly available bacterial and archaeal sequences. Kyrpides heads the JGI’s Microbiome Data Science … “While computationally derived MAGs have been a revolutionary tool for microbiology, it's a call to balance,” …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . Published in the … elements based upon their gene content and their genetic sequences. Roux was first author on a study featuring a new …
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Data Ecosystem
… cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and …
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Comparative genomic analysis of thermophilic fungi reveals convergent evolutionary adaptations and gene losses
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Uncovering Earth’s virome
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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