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Development of simple sequence repeat markers for the soybean rust fungus, Phakopsora pachyrhizi
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … and oil was also the largest plant project completed by the JGI. It has since been cited more than 5,400 times, … that threatens these crops as they grow. Asian Soybean Rust is a major problem. Leaves grow discolored and rust …
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A Chromosome-Scale Genome Assembly of the Flax Rust Fungus Reveals the Two Unusually Large Effector Proteins, AvrM3 and AvrN.
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( … to define the current shape of the microbial tree of life by filling in genomic information for thousands of … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Evidence of Asexual Overwintering of Melampsora paradoxa and Mapping of Stem Rust Host Resistance in Salix
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Analyze Data
… The JGI is involved in efforts to integrate data in support of new research questions that span domains. We also work with our partners to build infrastructure in support of new analysis techniques.  Notice Data Portal files will be … Chief Informatics Officer …
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Genomic features of bacterial adaptation to plants
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Quantitative iTRAQ-based secretome analysis reveals species-specific and temporal shifts in carbon utilization strategies among manganese(II)-oxidizing Ascomycete fungi
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Multilevel analysis between Physcomitrium patens and Mortierellaceae endophytes explores potential long‐standing interaction among land plants and fungi
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Game On: High School Students Drive Everglades Metagenomics Study
… decided to do an environmental microbial community (metagenomic) soil study in an untouched region of the … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about … to the body of scientific knowledge that can be accessed by the rest of the community. These high school students now …
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JGI@25: Using Team Science to Build Communities Around Data
… in 29 U.S. states and 35 countries. (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Metabolic Modeling of Fungi
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