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In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … culture. Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. …

… of Oceanography … Vyshenska D, et al. 2023. A standardized quantitative analysis strategy for stable isotope probing metagenomics. … Futures … Metagenome Science Program … Education … Selected Publications … Awards and Service …

Dr. Goodstein currently leads the Plant Comparative Analysis group, and is responsible for genome annotation, … regions of interest and gene copy number variation across multiple genomes.  eLife 11, e78526. Li et al., 2021.  Plant … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …

… attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … non-flagellated terrestrial fungi suggested that there were multiple flagellum loss events during the diversification of … question, despite of their well-designed sampling and analysis of their data at the time. Following the …

… insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms organized into multiple interconnected layers. The architecture of these … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …

Kaushal Sharma, one of five Antioch High School rising juniors who participated … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates … his student’s contributions as reviewing close to 3,800 metagenomes to verify geographic locations and assign …

Journal publication caps JGI pilot project with fledgling Florida … proper permits, to the refuge to collect soil samples from multiple locations. Back in the classroom, JGI researchers … metagenome assembly, and even an introduction to data analysis using the  IMG/M system . A Comprehensive Learning …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and … IMG/M system serves as a community resource for comparative analysis and annotation of all publicly available genomes …