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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … to the market. And we get to say that six of those are based on natural product structures.  DAN: One of the things … the third episode of Natural Prodcast, and the third and final part of our Primer conversation, where we’ve introduced …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … the virus in 34 hosts or 26 percent of the single cells. Metagenomics sequencing then allowed the team to ask, for …
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Global Archaeal Diversity Revealed Through Massive Data Integration: Uncovering Just Tip of Iceberg
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment … Annual Meeting, Holmes discussed how to use genomics and metagenomics to better understand what is called the “virus … of viruses in the universe. He pointed to significant gaps in our understanding — of what viruses are out there, …
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Promoting the Power of Viral Metagenomics
… An article summarizing the field of viral metagenomics, authored by JGI researchers Lee … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s …
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Activity-based, genome-resolved metagenomics uncovers key populations and pathways involved in subsurface conversions of coal to methane
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Development of a High Throughput Platform for Screening Glycoside Hydrolases Based on Oxime-NIMS
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Uncovering Earth’s virome
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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
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Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
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Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … awards DEB1840243, EAR1836768 and DEB1457794. Funding support also was provided from Colorado State …
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