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New Biological Insights Into How Deforestation in Amazonia Affects Soil Microbial Communities Using Metagenomics and Metagenome-Assembled Genomes
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Impact of Harvest on Switchgrass Leaf Microbial Communities
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Measurement of bacterial replication rates in microbial communities
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Using DNA affinity purification sequencing (DAP-seq) to identify in vitro binding sites of potential Novosphingobium aromaticivorans DSM12444 transcription factors
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer … of Science User Facility, hosted three undergraduates and seven graduate students from UC Merced through their … Nandita Nath & W. Berkeley Kauffman Project: “ 16s Sequencing of Barcoded Microbial Genomes ” Morgan Lavenstein …
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Mining Metagenomes for Cas Proteins
… Institute.  The Science Researchers report the discovery of miniature Clustered Regularly Interspaced Short … the untapped potential waiting to be unearthed in sequencing and analyzing uncultivated microbes. Summary The … by searching for Cas12d homologs across IMG/M’s assembled metagenomic data. It turned out that some of these were …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … The Science The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific Subtropical Gyre, microbes … #3777 (to EFD). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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CSP Functional Genomics
… Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into … form and are reviewed annually. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … data usage by the applicant/community, and track record of the applicant.  Learn about the general review process or …
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Strain Engineering
… The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and algae previously with little to no genetic tools … integrated into a taxonomically diverse suite of microbial chassis strains for elevated opportunity for …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint … – problems that might need special technology for DNA sequencing, genomics, metabolomics, and synthetic biology, … Episode Transcript … This is the first episode of Natural Prodcast, a podcast produced by the US Department …
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Position-Specific Metabolic Probing and Metagenomics of Microbial Communities Reveal Conserved Central Carbon Metabolic Network Activities at High Temperatures
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Integration of Metagenomic and Stable Carbon Isotope Evidence Reveals the Extent and Mechanisms of Carbon Dioxide Fixation in High-Temperature Microbial Communities
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