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Three mutations repurpose a plant karrikin receptor to a strigolactone receptor
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Genome resequencing reveals multiscale geographic structure and extensive linkage disequilibrium in the forest tree Populus trichocarpa
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Microbial colonization and persistence in deep fractured shales is guided by metabolic exchanges and viral predation
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Learning to Look
… Roux noted of the result. “It troubled me for a long time that we had only a handful of representatives of … were being targeted by their hosts’ own CRISPR-Cas systems, termed “self-targeting,” and yet still survived. The persistence of these “self-targeting” inoviruses suggested …
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Taxonomic and functional restoration of tallgrass prairie soil microbial communities in comparison to remnant and agricultural soils
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Sterol methyltransferases in uncultured bacteria complicate eukaryotic biomarker interpretations
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Prokaryote Program User Advisory Committee
… The Prokaryote Advisory Committee is chartered to offer advice, guidance and counsel on the effective management and strategic objectives of the microbial and metagenome programs and report back to …
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Coupled laboratory and field investigations resolve microbial interactions that underpin persistence in hydraulically fractured shales
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Doubling Down on Known Protein Families
… online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … the samples, without being able to distinguish which gene belongs to each individual microbial species within a … diversity is definitely holding a lot of new secrets in terms of functional diversity as well.”  Researchers from …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers … genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science Researchers produced … developed and used an annotation workflow that combines three independent gene-prediction methods to produce more …
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Genome expansion and lineage-specific genetic innovations in the forest pathogenic fungi Armillaria
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