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Uncultivated Viral Populations Dominate Estuarine Viromes on the Spatiotemporal Scale
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Scaling metagenome sequence assembly with probabilistic de Bruijn graphs
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Webinar: SIP technologies at EMSL and JGI
… Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and … want to call it. But NanoSIMS can do that at a really fine scale, and we can also easily measure the 15N at the bulk level, if that helps at all.  6. Q:How would field applications of the rhizoboxes mentioned in Jim …
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Genetic determinants of switchgrass-root-associated microbiota in field sites spanning its natural range
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… and researchers more about the patterns and functions of environmental microbes. Researchers can use the tool to correlate protein … specific to the environment.  Machine learning was also a large part of the creation of the tool. The team used two … The work conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
… wants to understand how viruses impact the release of greenhouse gases from Arctic permafrost. But to see what …
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You Can Move, But You Can’t Hide
… to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. … recently described in  Nature Biotechnology  called geNomad identifies and classifies MGEs based upon their gene content … more accurately. Additionally, because it can process large datasets, geNomad is poised to become an essential …
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Genome‐Wide Association Study Identifies Candidate Loci Underlying Agronomic Traits in a Middle American Diversity Panel of Common Bean
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are … below the Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) and a chemical … which prefer to infect the host cell and then get passively replicated with the host DNA, have long been considered to …
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JGIota: Looking Back at Methane-Making Microbes
… gas: methane. Those emissions mainly come from gut microbes — the bacteria and archaea breaking down plant … matter. So since 2010, the JGI has supported researchers studying those microbial methane-makers. Eventually, that …
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Soil pH influences the structure of virus communities at local and global scales
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Carbon-negative production of acetone and isopropanol by gas fermentation at industrial pilot scale
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