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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… to identify over 27,000 microbial genes. The data from that study is now used across California State … of a course-based undergraduate resource experience. Hear from CSU San Marcos Professor Matt Escobar and UC Davis … of the JGI User Executive Committee, on how that study went from the lab to the classroom. …
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High-quality permanent draft genome sequence of Ensifer medicae strain WSM244, a microsymbiont isolated from Medicago polymorpha growing in alkaline soil
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying … at UC Berkeley. Dr. Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University where … by DOE and through continued competitive grant support from NIH. …
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Improving the Cacao Genome and Phytozome
… brands couldn’t exist without cocoa.  But today the plant is under threat due to climate change and devastating … will be cocoa for chocolate tomorrow In 2010, a draft first genome of  Theobroma cacao  – the tree that produces cacao … by HudsonAlpha scientists, with the help of funding from Mars Wrigley. The annotated genome has been updated to …
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Power in isolation: insights from single cells
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Evolution of a Fungal Gene Expression Regulator
… than 500 species of fungi. The Impact Interactions between plants and fungi run the gamut from mutually beneficial to antagonistic. In fungi, 5mC is … DNA modifications (epigenome).  In  Nature Ecology & Evolution , a team led by Robert Schmitz at the University …
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A Complex Confection Decoded: Sugarcane Reference Genome
… can adapt to future environmental conditions. Additionally, insights from the genome could help scale sustainable … protect other crops facing similar pathogens. Summary Many plants, sugarcane included, are polyploid and have multiple … effects of breeding practices that transformed sugarcane into production factories for sugar and biomass. …
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Enhancers in Plant Development, Adaptation and Evolution
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Lignin‐modifying processes in the rhizosphere of arid land grasses
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Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils▿ †
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Crysten Blaby-Haas
… She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with Valérie de … to include in vitro protein-based techniques, algae, and plants, while focusing on understanding the evolution and function of proteins involved in metal …
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